"Asymptomatic" is kind of a sliding scale. Are you sick? No. Do you have a stuffy nose? Kinda.
[1] https://www.the-scientist.com/news-opinion/nearly-all-nyc-ar...
[2] https://www.bop.gov/about/statistics/statistics_inmate_age.j...
When you add in all the other things that count as comorbidities here, you're probably looking at like 75%.
https://www.kff.org/global-health-policy/issue-brief/how-man...
[1] https://issues.org/correctional-health-is-community-health/
i'm so tired of literally every other HN comment being like this. there is truly nothing more low effort / "i am very smart" than the HN-classic "do you have a source for that? where's the peer-reviewed study?". it adds absolutely nothing to the discussion, and yet i see all sorts of materially less obnoxious things be downvoted to oblivion.
[1] "citation needed"
They're all slightly different, but yes they're looking for antibodies against specific parts of SARS-CoV-2, like the N protein [0][1]. I think the N protein ones are most common. I just did a BLASTp against SARS-CoV's N protein and there's maybe ~90% homology? So I would hope they're using a site that's different between the two. Or, there's an assumption that most people have not been previously exposed to SARS-CoV or others with similar N proteins.
> Also aren't antibodies effectively developed in a sort of random process?
Yeah, but there's only so many prominent features to a virus that you can make antibodies against.
[0] https://www.abcam.com/novel-coronavirus-igg-antibody-detecti... [1] https://www.ncbi.nlm.nih.gov/protein/QHW06046.1?report=fasta
Perhaps humans tend to have enough random antibody generation that they are likely to start mass producing most of the protein shapes that are able to bind to the virus? And as another commenter pointed out, there are not that many options to bind to.
I wish we had leaders that had the chutzpah to say things like, "look the science is inconclusive, so we won't arrest you, but please do the right thing and wear masks". But we don't. And also we have people spouting completely non-evidence based assertions like "if you don't force people to wear masks, then they won't". Which of course fuels assholes to flaunt not wearing masks, because now it's not about doing the right thing, it's about freedom.
https://www1.nyc.gov/assets/doh/downloads/pdf/imm/covid-19-d...
If instead we had done random sampling we could have been very accurately projecting the number of active cases pretty easily, but apparently we’ve mostly decided not to do that until now with the antibody studies.
Furthermore, people in environments with a lot of virus (i.e., cruise ships, hospitals, or just northern italian towns where the virus has run amok, tend to get sick and die at much higher rate than those antibody tests would suggest.
There may be a mechanism for multiple infection which makes multiple exposure more dangerous even if you have antibodies.
Do you have a source for that?
I think that will be the primary message that people will get from that study.
Simple question: Why?
For most coronaviruses, antibodies reflect only a temporary immunity, that is usual gone in 6-24 months, due to the nature of these viruses.
All an antibody survey shows is that antibodies can be created, not that they are effective long term. Showing a longer term immunity takes statistical analysis, usually after that temporary window has ended.
In fact, antibody surveys may not even show an effective temporary immunity, if the wrong kinds of antibodies are being screened for.
Knowing this, why was the antibody surveys supposed to be some golden bullet? The advice from the medical community was "this is being actively studied, wait and see."
The surveys provide the medical community with important data, but they don't really provide us with policy making data, and they certainly don't predict the future for the general population when exposed to the virus.
A good place to keep an eye on for the short term would be Sweden. Despite the lack of lockdown their disease penetrance is still on par with the UK.
10 fold over what? A problem since the beginning is that many people are confusing CFR and IFR. Worse is when people compare the IFR of COVID-19 to the CFR of the flu. Regardless, the IFR for COVID-19 has been thought to be .5-1% since the beginning. If we assume the NY antibody study is mostly correct (even with the sampling errors), I believe it puts the IFR in the .5-1% range [1]. If that IFR holds it still means 1.6-3.3M deaths in the US assuming the healthcare does not get overwhelmed.
[1]
deaths/(cases x 10 fold) x 100 == IFR
21908/(288313 x 10) x 100 == ~.75%
Data pulled from https://www.worldometers.info/coronavirus/country/us/ on 4/26/2020 @ 8am EST.
You cannot assume that 100% of people will be infected. Looking at case studies like USS Roosevelt (840 of 5000) and Diamond Princess (712 of 3,711) as the worst case prevalence because they are much higher-R environments.
So basically your IFR based fatality numbers could be divided by roughly 5.
There is some news out that is putting the IFR closer to .3% on the low end. That is great news if it holds up. The problem is that the numbers out of NY, if flawed would bring the IFR lower than reality, and they are ~.75% IFR.
Which is why when these studies happen, the public is told to wait for it to be assessed, rather than pretending all of us are remotely qualified to judge the content and draw conclusions from it about what actual risks the general population might be facing.
When the studies in question have a high rate of false positives, that is absolutely not the case. It may simply be a statistical anomaly, from taking the incorrect confidence interval.
Currently, from the studies taken, it looks like we have high rates of both false negatives, and false positives. Which means that the testing does not give you an accurate picture of whether a population group has previous infections or not.
With that said, the extrapolated numbers for NY do fall in line with the original IFR of .5-1% The downside is that if that is the IFR then the US is looking at 1.6-3.3M deaths assuming hospital systems can keep up as the infection spreads.
Edit. It's also important to talk about infection counts (what antibody tests are looking for) and case counts (people who show symptoms and end up seeking medical care). In the past when people were saying it's just the flu they were comparing COVID-19 IFR to the flus CFR.
But the 21% study is seriously flawed because it didn't do a random sampling of the population. We need that at a minimum to know with any certainty what the actual exposure rate is. The figures that are coming back from studies using random samples in other places have been much lower.
This would be a much better list to sample randomly from than "go to a grocery store and test everyone who walks in".
I should point out on /r/nyc, some local redditors saw the testing going on all week in the same location and posted about it, informing others. I suspect this led people who wanted a free test to actively seek them out, especially because it's so hard to get tested otherwise. I'm pretty sure I had it over a month ago and I still haven't gotten tested, so if I'd seen those posts in time I'd have headed over there to get tested myself. Point is, the sample is even further biased because word spread around and some number of people getting tested there were actively seeking it out for reasons.
What huge legal issues? This is all the government. Of course it has lists of all of its citizens, and can and does use said lists.
There are some tests trying to sample everyone in a geographic area (SF Mission census block) but the data isn't out yet because they're conducting tests as we speak.
* It will also show an undercount of at least an order of magnitude.
* Commenters will still pop up to explain why the results can't be trusted and which further studies are absolutely required before we believe them.
Also elsewhere in this thread it's mentioned that the Florida and Santa Clara results could be entirely explained by high type II error in the test. The Florida test appeared to have a false positive rate of ~15% when independently validated, which is basically the infection rate they found. In other words, this is a specific form of base rate fallacy where the test accuracy is really low.
It seems pretty likely that the data will come out showing at least 10%, so it's literally impossible for it to undercount by an order of magnitude.
How do you think a random sample of inhabitants would be off by a whole order of magnitude, anyway? Can you explain the mechanism whereby that might happen? The only thing that comes to mind would be using a worthless test with a 90+% false negative rate.
https://www.nytimes.com/2020/04/24/health/coronavirus-antibo...
So far as of Saturday at 6:49pm EST 16,919 have officially died in NYC.
I think the anti-body test in this case is fairly close and the death rate is probably 1% more or less depending on the demographic distribution. Obviously there are a number of people in NYC who will die over the next month even if all new infections where halted right now.
The serology tests are just wrong when only a small number of people in the sample were infected, which is what we’ve seen from the stuff in CA so far.
Another data point, ~12k healthy foreign workers in Singapore have tested positive. The city-state has only 12 deaths total (all elderly, not the foreign workers). In Singapore the foreign workers may have already been asymptomatic for weeks.
Based on NYC data, LA city data, Stanford's Santa Clara data, Singapore, Danish blood donor data, a picture is emerging that the virus is not particularly dangerous to healthy people.
- Over half of state prisoners and up to 90% of jail detainees suffer from drug dependence.
- Hepatitis C is nine to 10 times more prevalent in correctional facilities than in communities.
- Chronic health conditions, such as asthma and hypertension, and mental health disorders also affect prisoner populations at rates that far exceed their prevalence in the general population.
- About 40% of all inmates are estimated to have at least one chronic health condition. With a few exceptions, nearly all chronic health conditions are more prevalent among inmates than in the general population. [1]
With that said, the average age is much younger than the general population [2]. Age is by far the biggest factor in outcomes, followed by co-morbidities.
[1] https://issues.org/correctional-health-is-community-health/
[2] https://www.bop.gov/about/statistics/statistics_inmate_age.j...
https://www.chicagotribune.com/opinion/commentary/ct-perspec...
2. Over 5000 (roughly 40%) have been hospitalized https://www.scmp.com/week-asia/health-environment/article/30...
Data from antibody tests can so far be summarized as garbage:
- https://www.buzzfeednews.com/article/stephaniemlee/coronavir...
- https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw...
I guess the TL;DR of all of this is, this picture you're talking about is a fallacy premised on bad data
But as of 25-04-2020 at least 4 inmates have died to Corona virus according to https://eu.marionstar.com/story/news/local/2020/04/24/corona.... There are 2,564 inmates (https://drc.ohio.gov/mci).
If coronavirus goes around again, that could raise the death rate
It would be pretty novel for the human immune system to clear out the disease on it's own, then a few days later forget how to do that, and become re-infected. SARS-COV-1 saw immunity conferred for 2-3 years. [1] I suspect something similar is likely here, probably for a shorter duration due to the more limited severity, but long enough to get us to a vaccine.
Generally for as long as you show antibody response you won't be re-infected because that's what antibodies do. The link I provided to the study I referenced was specifically for the purpose of, and I quote: "to assess SARS patients’ risk for future reinfection."
"To be clear, most experts do think an initial infection from the coronavirus, called SARS-CoV-2, will grant people immunity to the virus for some amount of time. That is generally the case with acute infections from other viruses, including other coronaviruses." [1]
If you think this time is different the burden of proof is on you to provide studies and not provide unsupported, unsubstantiated conjecture.
[1] https://www.statnews.com/2020/04/20/everything-we-know-about...
In science, it's incumbent on those making the claim to provide studies and proof. That means you...
And to say that this is unsupported, unsubstantiated is ridiculous, and you know it. It's straight from the WHO's mouth.
Nothing I said contradicts the WHO.
> Don't you think that if this was a foregone conclusion, we'd be able to demonstrate that?
I'm sorry, do we need to re-prove how the immune system works? Why re-demonstrate the utterly obvious?
> Isn't it odd, that with people having been infected and recovered months ago, that no one is saying how long the antibodies persist?
No, because it hasn't been long enough. I'm confident that research is under way.
But an immune response from an actual virus should last for at least a few years. There are situations where you can get reinfected later in life if you're not exposed or given booster shots (likes Shingles).
Is there evidences that our adaptive immune system only generates short lived antibodies, and for what families of viruses?
It's like saying "I find it very strange no scientists came out on record this week with a study showing water remains wet -- does it?! How can we tell if we don't check again."
Lack of proof of an affirmative is not proof of a negative, and especially not when plenty of other evidence points in the direction of the affirmative (again, not conclusively).
I agree. In fact, its highly unlikely, as with coronaviridae we've seen that the milder the disease the less likely you are to obtain long-term immunity. Even SARS, a much, much more serious disease, gives you 2-3 years as per my reference.
However, that's not what GP was arguing. GP argued broadly that "people who test for antibodies [may not be] immune to future infections." That's extremely unlikely. The question is how many people, and for how long, and then how do we utilize that information. Broadly speaking a positive test for antibodies means you're pretty likely immune at the time the test is taken. Of course the question is how that antibody response changes over time.
I was pretty clear about that: "Generally for as long as you show antibody response you won't be re-infected because that's what antibodies do."
The WHO is saying don't issue one-off certificates of immunity for life on the basis of testing positive for antibodies at one point in time before we know more. I agree.
I suspect a round of infection is likely to tide us over to a broad vaccination program, but we need a study.
[1] https://thegate.boardingarea.com/wp-content/uploads/2016/04/...
""There is currently no evidence that people who have recovered from COVID-19 and have antibodies are protected from a second infection.""
They were prompted to issue this because some people were touting this idea of immunity being granted perpetually and allowing people to safely return to work.
"Broadly speaking, a positive test for antibodies means you're pretty likely immune at the time the test is taken."
That's in complete contradiction to what the WHO is saying. Read carefully: There is no evidence.
You're using circular arguments to provide bad information. Something you've consistently been doing.
"...but we need a study."
Why? You've said it's unlikely to be different than other viruses. Of course we need a study, because we don't know.
There is currently no evidence of X does not mean X is not true. It just means there's no evidence of X being directly true yet. Nothing I said contradicts the WHO.
What I said was that we can reasonably infer from similar coronaviruses (including both more and less severe ones that are up to 90% genetically identical) that immunity is conferred. Also from other viruses. We shouldn't base our global health policy decisions on that until we have conclusive evidence but there's no reason for you to continue with the messaging when all evidence points to immunity being conferred for some duration of time.
Specifically what I said was that we do not have enough evidence to issue prophylaxis certificates, but that chances are good immunity is conferred based on studies of very similar diseases. I also stand by the fact it would be hugely surprising (totally novel) that any of those testing positive right now are actually re-infections due to the limited timescale involved.
Seeing smoke doesn't mean there's fire, but it means there's a pretty good chance of fire. Yeesh.
You have not brought any evidence to the table. If there is a study that says SARS-COV-2, unlike the majority of (all?) viruses and all coronaviruses that results in immune response sufficient to clear the disease that then immediately dissipates, I'll certainly accept the premise.
Until then, a preponderance of evidence points (or suggests without proving conclusively) otherwise.
> That's crystal clear, but it doesn't align with your opinion that this is just like the flu in seriousness.
That is not my opinion. My opinion is that it's milder than the flu for young people (it is) [1], and much worse than the flu for older folks (it is) -- no citation needed, I assume. To suggest otherwise would be to ignore the evidence you claim to hold sacrosanct.
https://www.technologyreview.com/2020/04/27/1000569/how-long...
powerful argument there, not.
With SARS1 there was continuing damage post 6 months.
SARS-COV-1 had an IFR (not CFR) of 14-15%. Broken out, it's less than 1% for people younger than 25, 6% for those aged 25 to 44, 15% for those aged 45 to 64, and more than 50% for people 65 or older, officials said. [1]
On the other hand SARS-COV-2 has an IFR of somewhere in the lower quartile of the range 0.1% to 1%, trending to around 0.3%.
Not to mention, I argued that lung function would recover, to which you said "strong argument, not [the much worse disease saw lung function recover in 6 months]" which implies you were actually supporting my argument not refuting it.
The coronaviridae family is huge, and fatality varies from ~0% in the 15% of common colds they cause to 0.1-1% for COVID to 15% for SARS-COV-1 to 50% for MERS. I can't stress this enough. SARS-COV-1 and MERS are not SARS-COV-2, they are much worse diseases.
[1] https://www.cidrap.umn.edu/news-perspective/2003/05/estimate...
For a patient, a high false negative rate is usually worse. For an insurer, a high false positive rate is usually worse. The perspective matters.
At an individual level, false negative seems more dangerous. But at a macro level, a high false positive rate could lead to taking dramatically policy decisions
I agree with the caveat that false negative rate is much more relevant for society when a disease is very contagious. Take measles, with an R0 in the teens. A high false negative rate can cause explosive growth in the numbers of people catching the disease, which I think is what makes it relevant to the COVID-19 scenario
Implementation examples: South Dakota and Sweden.
It seems clear that the infection rate has been severely under counted, meaning mortality rates are artificially high. Even better (from the standpoint of restarting) that "flu-like" mortality rate is concentrated in people over 60 years old.
What that all means together is the economy can easily restart, with the most vulnerable (old and sick) taking extra precautions.
This entire thing has been a fascinating exercise in how poorly central planning can work given bad information. The cure has been vastly more damaging than the disease.
https://www.medpagetoday.com/infectiousdisease/covid19/85717...
Besides, the article you pointed down in a reply is about a different kind of test.
I do disagree that a false negative rate is not important in the context of a disease where asymptotic cases may still be contagious, however.
There was a nursing home in Massachusetts which had 51 out of 98 residents testing positive but asymptomatic in early April. While this sounded encouraging in the sense no one was critically ill because of coronavirus, a few weeks later 19 had died and about 30 more had tested positive.
Let’s wait a month until there is a clearer picture about the impact of the virus on a particular population of people.
https://www.boston.com/news/local-news/2020/04/04/coronaviru...
https://www.wcvb.com/article/85-of-patients-at-wilmington-ma...