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Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by nickelcitymario on Tuesday October 30, 2018 @04:24PM (#18340956)
So to the non-geneticist noobs (like me), is it correct to interpret this finding as suggesting that the promises of CRISPR may be dead in the water?

Does this mean all the hype was nothing more than hype?

Should anyone with investments in CRISPR be seriously looking at dumping their stock?

Should anyone who was holding out on CRISPR to give us super powers / cure disease / etc start drinking copious amounts of alcohol instead?

Despite my tone, I seriously am asking what the implications of this are, because it's not my area of expertise.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by chongli on Tuesday October 30, 2018 @04:36PM (#18341058)
CRISPR holds way more promise than silly fantasies of human genetic enhancement. The most exciting and practical uses for it apply to challenging everyday problems: food, energy, invasive species, biodiversity.

Besides, the ethical problems with experimenting on human beings are extremely intractable.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @02:57AM (#18343810)
> CRISPR holds way more promise than silly fantasies of human genetic enhancement

I really dislike pandering, dismissive statements like this.

What's so inherently wrong with the entire category of genetic "enhancements" (changes for a perceived positive benefit)? You can't respond to this by just pointing out some proposed enhancements or motivations that are silly. I'm asking why you object to the very idea of any enhancements.

What about changes to make the following at some point in the future (these are just to give the general idea of positive changes, I'm not saying CRISPR could necessarily be used for them). These are things that in principle could be addressed by genetic "enhancements".

- stop people from getting diseases like celiac disease

- lessen our evolutionary desire for fatty and sugary foods (that no longer makes sense in the modern world, and which causes great harm)

- address some of the more egregious cognitive biases that cause so many problems in the world

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by SmellyGeekBoy on Wednesday October 31, 2018 @06:10AM (#18344445)
> address some of the more egregious cognitive biases that cause so many problems in the world

I'm not sure how to interpret this - are you saying we should use CRISPR to make people think a certain way? If so this seems like a pretty horrific suggestion.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @06:23AM (#18344493)
Humans are, for example, very poor at making risk assessments. Evolution has "programmed" our brains to focus too much on certain things and not enough on others. These heuristics might have made sense in ancestral environments bit are quite harmful in today's world. Evolution has already "made us think a certain way". Why would it be so horrific to, for example, lessen certain of those tendancies, if they are harmful?
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by wgjordan on Wednesday October 31, 2018 @09:14AM (#18345351)
In order to consolidate the consensus needed to genetically alter specific 'cognitive biases' that are 'harmful' to 'humans' in 'today's world', you'll probably first need to establish a global totalitarian dictatorship ('take over the world'). That adds an extra technical challenge beyond CRISPR itself, but you can always shoot for the moon and land among the stars.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @09:29AM (#18345458)
Why do you think it'd require a global totalitarian dictatorship??

(Also, why do you put 'cognitive biases' in quotes, as if it's a notion of suspect legitimacy?)

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by abundant on Wednesday October 31, 2018 @01:09PM (#18347459)
One reason to maintain skepticism about the “cognitive biases” concept is that the phrase implies a value judgment— “cognitive heuristics” would be a more value-neutral framing.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @01:18PM (#18347547)
It's a well-established, respectable area of research. https://en.wikipedia.org/wiki/Cognitive_bias

You think simply because it implies a value judgement that you can be skeptical of it?

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by snerbles on Wednesday October 31, 2018 @11:56AM (#18346788)
How are you going to enforce your eugenics program when a sizeable chunk of the population resists it?
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @11:59AM (#18346809)
Who said anything about a program enforced on people??

Also, you're assuming it would necessarily be something people resist. Remember that this could be quite a fair way into the future. By that time our understanding of things like the human brain and how it works (and of all its limitations), and of how to change details of our bodies and brains, may be very good and well-accepted, such that it's not a big deal.

And, regarding "How are you going to enforce your eugenics program" (emphasis added), grow up.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by wgjordan on Wednesday October 31, 2018 @12:30PM (#18347108)
Forcing all humans to think one specific 'rational' way, eliminating all 'cognitive biases' to the contrary is definitely something people resist. Not everyone shares your world-view, value system, etc.

And "eugenics" is 'a set of beliefs and practices that aims at improving the genetic quality of a human population' [1], which is exactly what you're talking about here. There's a reason the term has fallen out of favor since WWII.

[1] https://en.m.wikipedia.org/wiki/Eugenics

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @12:56PM (#18347346)
Who said anything about forcing people!?! I literally said "Who said anything about a program enforced on people??" in my previous comment, and yet you seemingly are going out of your way to misrepresent what I'm saying.

Who said anything about "Forcing all humans to think one specific 'rational' way, eliminating all 'cognitive biases'", either! Show me anything I wrote that even suggests this.

> And "eugenics" is 'a set of beliefs and practices that aims at improving the genetic quality of a human population' [1], which is exactly what you're talking about here.

Show me where I said it wasn't "eugenics". (but there's a big difference between forcing people into it and it being voluntary. There's also a big difference between various alternatives for what the genetic changes are, and I've been very clear about what sorts of things I'm talking about).

I'm amazed at the disconnect in this subthread between what I have actually said and what people are claiming I said!

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by snerbles on Wednesday October 31, 2018 @12:14PM (#18346965)
Changing how people fundamentally think and reason about things is a big deal. Probably the biggest deal out of your suggestions from a societal perspective. Such transformative things will be met with pushback, and if such a program is deemed beneficial by the powers-that-be it will be pushed upon the populace through means anywhere from marketing campaigns to outright genocide.

To suggest otherwise is to ignore history.

And since you suggested it and are actively defending it in this thread, yes it is yours in the context of this thread. Own it.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @12:24PM (#18347053)
I'll ask you the same question I asked the other person

Humans are, for example, very poor at making risk assessments. Evolution has "programmed" our brains to focus too much on certain things and not enough on others. These heuristics might have made sense in ancestral environments bit are quite harmful in today's world. Evolution has already "made us think a certain way". Why would it be so horrific to, for example, lessen certain of those tendencies, if they are harmful?

The examples I gave are hardly of "Changing how people fundamentally think and reason".

> Such transformative things will be met with pushback

It certainly could be. There's also what I said in my last comment, about why that's not necessarily so. Which you have ignored.

> if such a program is deemed beneficial by the powers-that-be it will be pushed upon the populace through means anywhere from marketing campaigns to outright genocide.

That is such a ridiculous argument to make in response to what I have said.

That is to assume that 1) the governments feel so strongly about it and 2) feel that they need to go to extreme lengths to make their will accepted. There is no reason to think that either of those conditions would be true in the case of DNA modifications like I have talked about. You certainly haven't attempted to argue for it.

Your argument could be used against any suggestion. "If such a program of combatting global warming through enforced tax on carbon is deemed beneficial by the powers-that-be it will be pushed upon the populace through means anywhere from marketing campaigns to outright genocide." See how ridiculous that sounds?

> And since you suggested it and are actively defending it in this thread, yes it is yours in the context of this thread.

Grow up. You said "How are you going to enforce your eugenics program". Show me where I said anything that even implied some sort of 'program' that is 'enforced' upon people, or that I had some sort of plan to do so? Don't try to make it out as if you were saying something else.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by patates on Wednesday October 31, 2018 @08:07AM (#18344956)
> lessen our evolutionary desire for fatty and sugary foods (that no longer makes sense in the modern world, and which causes great harm)

What about making them harmless instead? Surviving on donuts (plus perhaps supplements) and staying perfectly healthy... Think about it! :D

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @08:09AM (#18344964)
Sure, that kind of thing might be an option too.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by fifnir on Wednesday October 31, 2018 @07:24AM (#18344772)
> I really dislike pandering, dismissive statements like this.

And I (as a scientist) really dislike having to frame everything I do as being relevant to human medicine for laymen to appreciate it.

Some things are extremely valuable even if they can't be used to treat cancer and congenital disease.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by nickelcitymario on Wednesday October 31, 2018 @09:02AM (#18345284)
I can appreciate that.

My only counterpoint is that I and many other "laymen" (as apparently we're referred to?) can't be expected to appreciate your work if you can't explain it.

It's not like genetics is the only field that struggles with this. I'm primarily a web developer and still remember the 10+ years of trying to explain to people why "The Web" was an important technology that would radically impact all of our lives. I still remember the bubble. I still remember being told this was a dead field. Where are those people now?

I remember how dismissive people were about mobile apps, too.

The same challenge applies to AI, blockchain, virtual/augmented reality, etc.

As a non-scientist, I struggle to explain to people why it's important that we increase our funding and support for all of the sciences. It's hard to appreciate how seemingly "useless" discoveries combine with other "useless" discoveries to give us the amazing advances in technology and medicine that we have today.

BUT, we have to try.

And when some "layman" dares to ask about the meaning of such-and-such a discovery, maybe take a deep breath, recognize we don't all have you incredible knowledge about this topic, and appreciate that someone is expressing interest in what you do, in the only terms they have available to them.

All of which was a long-winded way of saying: All I know about CRISPR is what I read in relatively mainstream publications. Help me out. Or don't. Your call, really.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by fifnir on Wednesday October 31, 2018 @10:41AM (#18346062)
I re-read the thread and you're right, you were a bit unfairly "attacked" for asking a reasonable question. I focused on what you said without taking context into proper consideration, sorry for that. I was not responding to your original question, but more so to ... something in my head I guess.

Of course, absolutely, explaining what we do is hugely important. Actually I think that bringing new knowledge to the rest of humanity is the second most important thing after actually generating said knowledge.

> can't be expected to appreciate your work if you can't explain it.

The frustration is that people only seem capable of appreciating science when it has direct and tangible benefits for humans. (and that's why i posted the previous post, not cause you dared ask a reasonable question)

"Why do you do this?" "What can we use this for in humans?"

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by jamesrcole on Wednesday October 31, 2018 @11:09AM (#18346304)
In addition to what you've said about the frustration, there's the following.

Basic research is vitally important, and has contributed so much to society. Yet by its very nature you can't predict if how any specific piece of basic research will provide benefit.

It's a fundamental misunderstanding of basic research and scientific and technological development to expect to be able to know, and thus say, what the benefits might be.

Rather than expecting to be able to predict the benefits, we have to have a more 'statistical' set of expectations. That, on aggregate, and over time, basic research will provide substantial benefits.

And it's not just the general public who don't appreciate this. I find that many people working in applied research don't appreciate it either.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by nickelcitymario on Wednesday October 31, 2018 @11:55AM (#18346780)
Completely agree :-)

(And no apology needed... I shouldn't take things so personally.)

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by nserrino on Tuesday October 30, 2018 @05:13PM (#18341326)
How is a CRISPR trial on a terminal patient any different than another experimental medical trial on that same terminal patient?
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by whatshisface on Tuesday October 30, 2018 @05:21PM (#18341387)
Because you don't modify the genetics of terminal, living adults, you want to modify the genetics of single-cell healthy zygotes (who will, you hope, later develop into healthy adults).
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by mbreese on Tuesday October 30, 2018 @06:13PM (#18341722)
Sure you do. A lot of the promise of CRISPR therapies were for modifying cells in an adult or child. Using CRISPR/cas9 to “fix” a genetic issue in someone who was already born. For example for adding back a good copy of the gene that causes cistic fibrosis or sickle cell anemia. There were also potential cancer therapies based on the technique.

In these cases, the presence of cas9 antibodies is a severe limit to many of the techniques that these companies were working towards.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by SmellyGeekBoy on Wednesday October 31, 2018 @06:11AM (#18344451)
I agree. My father has terminal cancer and has been practically banging down doors to try to get onto medical trials for new experimental treatments. If other people in his position want to do the same thing then who are we to judge?
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by 88e282102ae2e5b on Tuesday October 30, 2018 @08:32PM (#18342459)
No. Working around this takes some effort but is straightforward and uses well-known, existing techniques. There's a lab I know of that considered trying to modify the protein so it could evade the immune system, but they decided against it since they figured the group that published this paper would have too much of a head start and there's no way they'd be able to compete. I'd give it a year or so, and that's assuming none of the other Cas9 or Cas12a variants are already usable.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by Camillo on Tuesday October 30, 2018 @07:53PM (#18342250)
It sounds like they can work around this with immunosuppressants. Which may be for the best... you wouldn't want random bacteria to be able to edit your genome at any time, would you?
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by acomjean on Tuesday October 30, 2018 @04:37PM (#18341070)
Well CRISPR works in flies as some of the fly stocks have been switched from using RNAi to CRISPR for their gene edits.

Fly immune systems obviously are quite different. But the technique still holds a lot of promise. Like any cutting edge technology there are potential problems in developing it into useful therapies, and there is a chance something better will come along and displace it.

It is very difficult to edit all the dna of living organism as each cell has a copy. Easier to do as an organism develops.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by meschi on Wednesday October 31, 2018 @07:35AM (#18344822)
This is how you get Brundlefly :O
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by justfor1comment on Wednesday October 31, 2018 @05:11PM (#18349310)
Do you think humans would stop at the first hurdle they encounter in their endeavours? How about the 99th hurdle? CRISPR is a naturally occurring gene editing tool. We have only recently started engineering solutions using it. Once this tool meets the full might of human ingenuity and our constant resolve to improve things, it can overcome great biological challenges. Eliminating disease carrying pests, curing genetic defects in children, shortened crop cycles, tastier strawberries these are some amazing possibilities that CRISPR holds. It might take some time but we will get there. So no the game is not over. It won't be over as long as we have a few humans on the case.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by User23 on Tuesday October 30, 2018 @10:37PM (#18342943)
What the layman thinks of genetic engineering magic is going to have to happen in the germline. That means it's not going to help you or me or anyone else already alive.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by klmr on Wednesday October 31, 2018 @06:29AM (#18344523)
This is true for most genetic engineering applications but not all. Somatic gene therapy has been successfully performed in a few cases. There will almost certainly be more applications in the future, and it’s reasonable to expect that they will be able to handle some prevalent diseases (such as all types of diabetes).
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by refurb on Wednesday October 31, 2018 @11:11AM (#18346315)
The only approved genetic therapies (Luxturna, Strimvelis, Glybera, others) are all for children or adults. To say you can only use it for germ line modification is just plain wrong.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by klmr on Wednesday October 31, 2018 @01:05PM (#18347430)
True but that’s purely for legal/ethical reasons, not (directly) scientific ones. Most scientific uses of CRISPR (and other gene editing techniques) by far happen in the germ line. Germ line research (and, thus, applications) are lacking in humans not because it would be scientifically hard, nor because it won’t eventually happen, but because of hard ethical problems with such research.

And the comment that I replied to implies that it is talking about certain applications of genetic engineering which have to happen in the germ line. So I disagree that what it says is “plain wrong”, it’s just incomplete.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by refurb on Wednesday October 31, 2018 @09:37PM (#18350804)
I’d say it’s less for ethical reasons (though that’s true) and more because the technology for modifying germ lines is nowhere near as advanced as inserting DNA into non-germ line cells.

We have no idea what the impact would be for modifying germ line cells in a developing human being.

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by elocinstr8t on Tuesday October 30, 2018 @10:11PM (#18342824)
I hope not. CRISPR has a lot of potential to change our lives. I thought they're actually a little closer to finding solutions to treatments of incurable diseases and giving us life longevity. Now I'm not so sure.
Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by mtgx on Tuesday October 30, 2018 @05:10PM (#18341300)
Anything as powerful as CRISPR will most likely be misused and have a very high error rate/unexpected consequences initially anyway:

https://labiotech.eu/medical/crispr-therapy-cancer-risk/

CRISPR is definitely going to go through the "hype cycle" - as in the hype will die out long before we can prove it can be safely used in humans, and these achievements will likely happen in the background over several decades time span.

https://en.wikipedia.org/wiki/Hype_cycle

Re:Pre-Existing Immunity to CRISPR Found in 96% of People in... by klmr on Wednesday October 31, 2018 @06:35AM (#18344558)
The difference between CRISPR and many other overhyped technologies is that CRISPR has already proven its mettle. It’s being used productively daily in labs across the world and has lowered the cost of performing many experiments, or even made new experiments possible in the first place.

You’re right that there’s a certain amount of hype surrounding CRISPR, especially when it comes to potential medical application (whether this works remains to be seen, although I and most people in the field remain optimistic). But until something even better comes along I don’t think interest in CRISPR will die down soon.