xor r0,r0 seems a small price to pay.
For advanced implementations, the r0 can also be used without considering register dependencies since it discards all writes and always read 0, so your "xor r0,r0" would possibly stall a long pipeline if the preceding instruction depended on the old value of r0 in a calculation before clearing it with xor.
Lastly, I guess one has to see it in the light of its day, loading registers with 0 was and probably is rather common at loop starts and so on, so it was deemed useful, just like some FPUs have instructions to read constants like PI, e and ln(2) just because it seems to be a good thing to waste a certain amount of transistors on if it is commonly used.
but the same advanced implementation that can break dependencies when reading/writing to r0 can do the same when handling xor r0,r0. Indeed that's exactly what many CPUs do.
I'm not qualified to say whether a zero register is better or not, but I will mention that it basically requires your ISA to be 3 operands that has a cost in term of instruction length: so you save bits to have a smaller set of instructions, but need more bits to increase the number of registers.
RISCs are usually 3 operands anyway for many reasons, so in practice it doesn't make a difference I guess.
Fair enough, but if the claim to fame over the current dominant ISA is that there isn't weird baggage (big deal or not), there is an opportunity for another new ISA without that baggage (important or not)...