Re:How Biologists Are Creating Life-Like Cells from Scratch
by epmaybe on Friday November 09, 2018 @09:56AM
(#18414781)
Seems like synthetic biology is a field you should look into! It's very exciting!
Re:How Biologists Are Creating Life-Like Cells from Scratch
by mothsonasloth on Friday November 09, 2018 @09:59AM
(#18414803)
Ill need to look into it.
My background is in Biomed but I joined the dark side and became a computer scientist instead.
Re:How Biologists Are Creating Life-Like Cells from Scratch
by najarvg on Friday November 09, 2018 @01:37PM
(#18416709)
Slightly OT but related interesting trivia. Look up a language called CRN++ developed by UT Austin for "programming deterministic (mass-action) chemical kinetics in performing computations".
Press release type article here - https://interestingengineering.com/synthetic-biology-gets-a-...
ArXiv abstract here: https://arxiv.org/abs/1809.07430
Git repo here: https://github.com/marko-vasic/crnPlusPlus
Hope to see some interesting synthetic molecules published by you :-)
Re:How Biologists Are Creating Life-Like Cells from Scratch
by hexscrews on Friday November 09, 2018 @10:25AM
(#18415051)
You may also be interested in the field of biological computing (https://en.wikipedia.org/wiki/Biological_computing#Biochemic...). Since your background covers both biology and computer science. Plus the field is new enough that you could be a part of some exciting research.
Re:How Biologists Are Creating Life-Like Cells from Scratch
by epmaybe on Friday November 09, 2018 @11:47AM
(#18415768)
I wouldn't call it the dark side, I think there can always be an overlap in one's skillset.
Re:How Biologists Are Creating Life-Like Cells from Scratch
by dnautics on Friday November 09, 2018 @12:29PM
(#18416139)
having been a biochemist (and maybe going back) but also a professional programmer, I am very pessimistic about this.
One time, though, I used ruby to scrape a chinese website where they made 'public' the genome of an organism. They clearly weren't interested in actually making it public (as the sequences were very hard to pull), and after we had gotten the data they made it impossible and took down announcements that it was public, so sometimes real computer skills are welcome!
Can you imagine in the future, we could have translations from logical code to biochemical pathways. You could specify the dependencies of a cell you are building in a similar fashion to (maven, npm, make).
Using bioinformatics data to configure your cells behaviour.
There would be compilation errors were cells would not be stable or materialise, and runtime errors in which a metabolic or other type of pathway fails, causing the cell to throw an exception (dies/ or emits other action).
I would truly relish the moment when my cell gets a virus.