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Re:A public TrueCrypt Audit by maaku on Wednesday October 09, 2013 @05:10PM (#6523890)
There are many more reasons than that. Getting a deterministic binary is a achievement in and of itself:

http://gitian.org/

Re:A public TrueCrypt Audit by 0x0 on Wednesday October 09, 2013 @06:26PM (#6524306)
It could still be useful to try a tool like zynamics bindiff to compare a build from the source against the binary download.