The people in the EU parliament are people you vote for, directly.
You can not vote for MEPs / parties / ideologies not present in your country.
Let's say I think breaking encryption is a bad thing and I would like to support and vote for someone or something that represent my opinion. Even if there are MEPs and parties in the EP that support what I want, there is no such entity in my country so I can vote for someone else who is against my opinions, or just not vote (and help the biggest party).
I can do anything, my opinion would not matter and my vote is useless for me. That's an inherent issue with the parties / integer number of elected officials, but it is much more serve in a "two level system" like the EP elections.
In other areas:
For the ChatControl, there should be something so a regulation can not be proposed again and again and stopping just before voting it down.
There should be a way for making EU-wide referendums whose result is binding / obligatory for the EU (council and commission) and thus for member states, too. (This is probably hard if you want "better representation" of different sized countries and probably there would need a fairly high bar for passing.)
Make the European Citizens' Initiative easier / clearer, it could be a simpler, less formal, non binding option to an EU-wide referendum.
Indirect democracy is just oligarchy with extra steps
Does that mean there’s the potential to form a party around your views?
(Not saying it’s a practical solution for you, but that the system probably would expect a new view to voice itself)
This however seems like a non issue to you?
Not really, you vote for parties local to your country. You can not vote for EP parties directly.
Anyways, ProtectEU, the new "break all encryption if chatcontrol fails" was proposed by a secret group, whose identities still not known. That's even farer away from a good and democratic institution than unelected bureaucrats.
I don't think calling these anti-EU-propaganda is a good thing, they are valid criticism (even if the EU is mainly a good thing), and they should be addressed at some point in time.