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Re:Adding new DNA letters makes novel proteins possible by adrianratnapala on Thursday January 17, 2019 @06:43PM (#18935750)
What?

You start with a two-letter code, then something evolves that puts an (initially) rare third letter at a few locations on the tape. All the old "gear" that reads two-letter code can still read most of the tape.

Re:Adding new DNA letters makes novel proteins possible by rotexo on Thursday January 17, 2019 @07:12PM (#18935905)
It is difficult to imagine that as a possibility. The spacing of three mRNA nucleotides is pretty important structurally in the process of translation from mRNA to protein via the ribosome. It is difficult for me to imagine a ribosome that could operate arbitrarily between codons of two and three nucleotides, unless I am misunderstanding your comment.

A translational reading frame consists of non-overlapping codons of three nucleotides. If one nucleotide is skipped, the entire downstream message is thus garbled. So how would the translational machinery operate if each codon arbitrarily consisted of two or three nucleotides?

Re:Adding new DNA letters makes novel proteins possible by asdff on Thursday January 17, 2019 @09:17PM (#18936512)
I see what you are getting at, but I think what the other comments are saying is that for the third nucleotide position of a given codon, it does not matter which nucleotide this is. The amino acid to be used would only depend on the first two nucleotides, while the third nucleotide can be AUCG.
Re:Adding new DNA letters makes novel proteins possible by adrianratnapala on Thursday January 17, 2019 @10:49PM (#18936883)
Nah, I misunderstood completely.

I was thinking of how a hypothetical code might, in the abstract have evolved from binary, through ternary up to the (current base-4).

I haven't got enough biochem knowledge to speculate how three nucleotides per amino acid can evolve to have three.

Re:Adding new DNA letters makes novel proteins possible by dnautics on Monday January 21, 2019 @11:51AM (#18961568)
They have done this with a four letter expanded codon. The fitness of the bacteria tanks.