It's hard not to see this as informed by how badly Longhorn failed. Microsoft tried to make .NET the basis of their OS platform during Longhorn and failed miserably, in part because it was simply not built for that. CLR belongs as a layer on top.
[Disclaimer: I used to work at MS. Did not work on the Windows Runtime. These are my personal opinions.]
As far as Longhorn failing, certainly that was both a disaster in management and not just technology. After all, MS Corp felt generics were and impractical academic and theoretical idea that couldn't be properly implemented in a language like C# or the CLR.
What?!
Generics were only added to .NET 2.0, because it wasn't going to be done on time for the .NET 1.0/1.1 releases.
There are papers from the .NET Beta days already describing the way generics could be implemented, but additional work was still needed at the time.
Here's a history by Don Syme, who was one of the main people on this project:
http://blogs.msdn.com/b/dsyme/archive/2011/03/15/net-c-gener...
Quotes:
"But I do want to say one thing straight: Generics for .NET and C# in their current form almost didn't happen: it was a very close call, and the feature almost didn't make the cut for Whidbey (Visual Studio 2005)"
"being told by product team members that "generics is for academics only""
"It was only through the total dedication of Microsoft Research, Cambridge during 1998-2004, to doing a complete, high quality implementation in both the CLR [...] and the C# compiler, that the project proceeded."
Microsoft's C# track record shows MC Corp's commitment to higher-level programming pretty well, IMO. LINQ got added just to hit the "LINQ" target (and Erik Meijer mighta been a big force there). But even then: the C# 3.0 were only implemented to hit LINQ, not added as general language features. One big example: declaration type inference is half-assed and only exists to facilitate anonymous types. They've had years since to clean up the design and haven't shown any indication of doing so.(I still think C#'s the best out of the "mainstream" languages, but they could be doing a whole ton better.)
As for MSR vs MS Corp, as you put it.
It is called Microsoft Systems Research, it is still a Microsoft unit, with researchers on Microsoft's payroll.
So it is plain and simple, Microsoft.
You can target WinRT with the usual set of .NET languages, the only difference being the classes one uses.
Does C stop being C, if you don't use libc?
Which was cleared for anyone that cared to access the information available after the BUILD conference.
But hey, it is easier to form opinions based in twitter spread rumours, or something like that.
If you're talking about apps in the windows app store (so-called metro-style apps or whatever the current name is), then you're right that it meant throwing out a lot of code, but it's not true that all existing .NET code was excluded. It took some rejiggering. But once again, that's only if you want to deliver via the app store.
EDIT: asveikau has rightly pointed out I have confused two matters.
Are you equating .NET in general with Silverlight? Honest question.