With a weak patent you do not want a single victim with deep enough pockets to fight it. You want a large number who will pay you something to go away and stop ruining their lives.
"It'd be a shame if something happened to your little business..."
"Second: Farney said that his client is going after scanner users, not to avoid doing battle with big scanner makers like HP and Canon but because there’s no other use for the patents. Because of the way the patents are written, MPHJ actually can’t go after scanner manufacturers. Only the whole “system”—putting the scanner together with a network—infringes.
“The devices can be used in plenty of non-infringing ways," Farney explained. "Several of the major manufacturers have talked to us about these patents, and they agree with us. The product they sell is not infringing. It’s putting the whole system together. If you have an office scanner that scans with one button, is hooked up to a network, and can send e-mail—you infringe.""
Maybe I'm misunderstanding the intent of patents, but I would've thought they protected the interests of the inventor against competition by other inventors rather than users of an invented product?
"or doing something completely obvious."
This is also discussed in the article. Many things that many people (especially engineers) would consider 'obvious' or 'simple' really aren't under patent law (again, this mans claims), and in some cases, things that are 'obvious' now weren't when the invention was done. Which, to some degree, is true.
"Maybe I'm misunderstanding the intent of patents, but I would've thought they protected the interests of the inventor against competition by other inventors rather than users of an invented product?"
No, the point is to protect inventors by giving them a way to control under what circumstances (i.e., in most cases, after how much money has been paid) their invention can be used. Patents aren't about preventing other from inventing the same thing again, it's about having a monopoly on using/commercializing the invention.