I'm a scientific software engineer and computational biologist with a PhD in neuroscience. I've built agentic LLM orchestration systems for biomedical workflows, developed open-source bioimage analysis tools (VesselVio, published in Cell Reports Methods), and engineered reproducible analysis infrastructure adopted across biopharma R&D teams. I'm looking for scientific software engineering or ML engineering roles where I can build tools and systems that accelerate scientific discovery.
Remote: Yes / Hybrid
Willing to relocate: No
Technologies: Python, R, SQL, PyTorch, scikit-learn, LangChain, OpenAI/Anthropic APIs, Docker, AWS, Snakemake, Scanpy, Seurat, Shiny, PyQt, NumPy, pandas, Polars, pytest, GitHub Actions
Résumé/CV: https://github.com/JacobBumgarner/personal-website/blob/main...
Email: jacobbum21 at gmail.com
I'm a scientific software engineer and computational biologist with a PhD in neuroscience. I've built agentic LLM orchestration systems for biomedical workflows, developed open-source bioimage analysis tools (VesselVio, published in Cell Reports Methods), and engineered reproducible analysis infrastructure adopted across biopharma R&D teams. I'm looking for scientific software engineering or ML engineering roles where I can build tools and systems that accelerate scientific discovery.