Re:Enhancing R: The Vision and Impact of Jan Vitek's Maintai...
by cd4plus on Thursday May 16, 2024 @09:25PM
(#40385379)
yeah, I also disagree with this. It's true Seurat is still heavily used for scRNA/scATAC but I see most new models increasingly being written/tooled for python and based on anndata. Geneformer, scGPT, scVI etc. I wish there was better operability between the scverse stuff and Seurat, but Seurat went their own way from SCE/bioconductor so that's probably not going to happen.
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