You don't need a full vaccum. Even half an atmosphere would greatly reduce air resistance and allow for 4x the velocity in 1 atm.
Humans can survive (uncomfortably) at .5 atm and you eliminate the vacuum cannon problem simply by putting pressurization valves periodically throughout the tube.
This also applies to any sort of failure that compromises the vacuum. A dipshit with a rifle could kill anybody in the system in a fraction of a second. Burying the tubes is probably the only way to avoid this, but thankfully the whole thing is vaporware anyway.