But that scenario is based around "independent" reprisals. The real threat we are facing today is directly connected consequences...
> [government] can legally do far more things than private organizations
This completely misses my original point - both government and private organizations can do things that effectively punish. For example, a mall can kick you out and banish you for wearing an offensive T-shirt. This is not a problem when malls are but a small part of society, but form a restriction equivalent to government if one's entire society is made up of malls.
Title IX is a good example of a law which can be expanded to limit the freedom of speech and freedom of assembly by coercion. This has come about because federal funding is an indispensable portion of the modern research university's budget. As such, no 1 person, no 1 group can be allowed to threaten the University's compliance with the law. Therefore, the law enables the government to coerce the institution into severing its private contract with the offensive party - student or faculty. In effect, a government agency is able to punish political speech by proxy.
As 25% of the GDP, and probably upwards of 90% of the spending in many industries (e.g. defense contracting), the governments spending power has given it unforseen power to demand a trade of speech for access to economic opportunities. We need a law similar to "too big to fail" in sectors where the government has monopoly-like powers.