It's all about controlling the cultures you use for the fermentation.
That's why home-brewers have to be so careful about sterilizing their fermentation vessels and boiling their liquids. You absolutely, positively do not want the wrong microbe getting into your booze. If it's a wild one, it could end up synthesizing any number of organic chemicals that can negatively affect the final product.
The boiling happens with beer, mostly. With wine, you're usually relying on the yeast that naturally occurs on the surface of the grapes, so if you boiled (or pasteurized) it, there would be no fermentation unless you added additional yeast. That sometimes happens, because some people prefer consistency to authenticity.
Home brewers use fermentation vessels that allow gases to escape through a liquid trap and the whole process is done at positive pressure. You can bet your ass that those vessels are thoroughly sterilized before each use.
We may be talking past each other here.
Fermentation produces so much CO2 that it quickly fills up the vessel and pushes any remaining oxygen out. People didn't know where yeast comes from until recently. You're making it far more complicated than it is.
Though it depends a lot on your culture. The "kefir" sold commercially in the US does not have yeast in the culture, and therefore no alcohol or vinegar. It doesn't really qualify as real kefir. You have to acquire cultures and make your own to get the full experience. You also have to acquire a taste for it.