I think that's sort of the point that the article is making actually. That high probability does not imply truth. There are other non probabilistic ways to verify that coin is unfair, for example by looking at the density throughout the coin.
Even if you look at the density of the metal throughout the coin, there's still a chance I've altered your device to report the coin is fair. Or a passing microsingularity decided to play games with the scanning beam. Or you're just imagining the whole thing.
That's not to say one should despair that the world is unknowable. One only has to get used to the fact that, in practice, "true" just means "extremely, extremely likely".
But yeah truth is tricky.
Suppose I have a coin and flip HHHHH. Can you tell me the probability the coin is fair? No, it's fundamentally unknowable. We can say that a fair coin would have a 3% chance of flipping HHHHH (the p-value), but we can't say with what probability our coin is fair.
The p-value won't tell you if the coin is fair or not, but it can tell you the probability that the coin is fair.