cc_
I am not a deep expert in this field but there is a lot of work in post-quantum crypto that derives security from the hardness of some lattice-based problems instead of discrete log (E.g. New Hope being used in an experiment in Chrome is based on RLWE, I think).
From their FAQ it sounds like they have made progress on this front:
> What has Debug accomplished so far?
> We've developed methods for automated mosquito-rearing, and we know that we can separate males from females with high precision, and we’re continuing development of these technologies at larger scale in our lab.
The move to N-Trig hypothetically fixes both of these. Early reviews/videos say that corner accuracy is greatly improved, and the lack of a separate digitizer layer allows a thinner optical stack, reducing parallax (and allowing the device overall to be thinner).
Driver support has historically been an issue, but msft seems to be improving things significantly.
There are fewer levels of sensitivity and hovering doesn't work quite as well, but I am overall reasonably optimistic about the switch.
http://security.cs.rpi.edu/courses/hwre-spring2014/
The slides for lecture 4 (http://security.cs.rpi.edu/courses/hwre-spring2014/Lecture4_...) shows what various types of components (such as laser-trimmed resistors) look like on a die.