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Re:Join the open source uBiome GitHub repository for microbi... by ahmetbb on Tuesday July 21, 2015 @01:33PM (#9924067)
Been watching this story rise since the beginning. No comments left, nobody pays attention, even the title is out of place (what is joinong a repo anyway??). I think there's some magic behind the points this is getting on HN. :-)
Re:Join the open source uBiome GitHub repository for microbi... by bonobo3000 on Tuesday July 21, 2015 @01:50PM (#9924249)
Has anyone here derived actionable insight from their microbiome data? I sampled my gut and sure I can see its pretty far off from the average (e.g 51% Bacteroidetes compared to 22.5% average) but err so what? Google brought up a few studies related to microbiomes but there doesn't seem to be any real answer on what a "good" microbiome is, or how deviations from normal are linked to other diseases, how much is dependent on diet (a lot i would think).
Re:Join the open source uBiome GitHub repository for microbi... by tridint on Tuesday July 21, 2015 @02:03PM (#9924352)
To begin with, the reproducibility of your sample is in question - https://mrheisenbug.wordpress.com/2014/04/24/dear-american-g...

The resolution from uBiome data is also 16s, and (likely) too low to yield good information.

There is no definition of a good microbiome. The research is still in its infancy. Attempting to 'improve' your microbiome would likely be a mistake. The upside is that you may have contributed by paying uBiome.

Re:Join the open source uBiome GitHub repository for microbi... by chaosfox on Tuesday July 21, 2015 @01:53PM (#9924269)
I don't think github (or even git) is ideal for raw data storage.

https://help.github.com/articles/conditions-for-large-files/

Re:Join the open source uBiome GitHub repository for microbi... by emdagon on Monday July 27, 2015 @12:18AM (#9953314)
Actually, the repo isn't intended to store data whatsoever. It's for publishing tools (scripts mostly) anybody can use to peek into their own data (provided by uBiome).
Re:Join the open source uBiome GitHub repository for microbi... by r3bl on Tuesday July 21, 2015 @01:32PM (#9924061)
I really don't see the relevance of this blog post. What's so important about this story to be shared here?
Re:Join the open source uBiome GitHub repository for microbi... by br0_grammar on Tuesday July 21, 2015 @01:38PM (#9924114)
if they wanted to make microbiome data available they could just share some