Unlike system containers like LXC, appc means you now have an explosion of the state space whereby every container has their own independent copy of a host OS, yet relies on the semantics of its container manager to function, i.e. it is not easily introspectable with vanilla tools.
So you end up needing to build a small parallel userspace to handle things like service discovery, orchestration and provisioning, networking bridges, location transparency, resource scheduling and taken to its logical conclusion you start running a user-mode kernel (Mesos) on top of a base OS kernel (Linux) to provide further abstractions of OS resources and run extended versions of OS processes called frameworks.
I don't know if it's too early to tell, but I think people might have dug themselves into a ditch where in an attempt to escape the limitations of their kernel and userland, they've only expanded it with a concurrent layer and must maintain both.
Or you install a PaaS, which does these for you. I've worked on Cloud Foundry, OpenShift is a competitor. Both are far superior to rolling your own.
For example CoreOS comes with lots of tools helping to orchestrate and manage those clusters.
edit: the joke flew over my head.