Better solution:

    def invertTree(self, root):
        queue = []
        if root is not None:
            queue.append(root)
        while current is not None or len(queue) > 0:
            while current is None:
                current = queue.pop()
            current.left, current.right = current.right, current.left
            if current.left is not None:
                if current.right is not None:
                    queue.append(current.right)
                current = current.left
            else:
                current = current.right
        return root

No needless enqueuing / dequeuing of things unless you need to. As a bonus, if the nodes maintain a count of how many children the have overall you can always recurse on the smaller child first and use less memory.

Any particular reason why you're using an array as a stack (LIFO) but calling it "queue" (FIFO)?

Not sure why, but I'd feel iffy iterating on a list while mutating its content.

But I guess it's file while ignoring the order of the items, and just caring if it's containing items or empty.

Carry on :)

A functional approach:

      (defun mirror (tree)
        (when tree
          (tree 
              (tree-data tree)
              (mirror (tree-right tree))
              (mirror (tree-left tree)))))

For completness, here are the definitions:

      (defpackage :trees (:use :cl)
                  (:shadow #:copy-tree))
      (in-package :trees)
      (defstruct (tree (:constructor tree (data &optional left right))
                       (:type list))
        data left right)

As well as a test case:

      (mirror (tree 4 
                    (tree 2
                          (tree 1)
                          (tree 3))
                    (tree 7
                          (tree 6)
                          (tree 9))))

      => (4 (7 (9 NIL NIL) (6 NIL NIL)) (2 (3 NIL NIL) (1 NIL NIL)))