I'm quite surprised by this!
100bb has higher variance and therefore more luck, where 200bb has lower variance
So, I would say the 200bb tournament rewards skilled (human) players more effectively. As a skilled player, I would seek out the 200bb tournaments.
My immediate thought would be that a computer player would be rewarded better in the 200bb tournament.
But, even in the 200bb situation, players will have to play short stacked some of the time. Perhaps the difficulty for bots is the requirement of changeable modes here?
The fact that every hand starts at 200bb's in this challenge is actually very good for humanity.
On another note, it's very interesting to see that the bot found independently that huge overbets on the river are close to optimal. This is something that only recently some top HU pro's started incorporating in their games.
I think you can actually build a fairly competitive HU bot for 100bb games with very simple means (rules based with a bit of statistics thrown in, no opponent modelling or advanced features or learning). At 200bb it's a lot harder and researchers that approach it from an "understanding of the game" POV rather than a "pure computation" POV have a tougher time.
Edit: I only know Doug (aka WCGRider). Wish they would play against Ike Haxton, jungleman12, sauce123, Galfond or Durrr