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Re:Computational Neuroscience in Python by bgalbraith on Wednesday June 04, 2014 @01:49PM (#7847040)
Related, a few years ago I wrote a series of blog posts with code and discussion on how to do some basic neural simulations in Python: http://www.neurdon.com/author/byron/. This includes spiking leaky integrate-and-fire neurons, the Hodgkin-Huxley neuron model, and the Izhikevich model neurons.
Re:Computational Neuroscience in Python by mef51 on Wednesday June 04, 2014 @02:12PM (#7847172)
Cool! I'm currently doing summer research modelling neurons and your posts really helped me learn this stuff. I would go through your code line-by-line writing it out and then I'd just play with the parameters. It was a nice starting point. Thanks! https://github.com/mef51/HodgkinHuxleyNeurons
Re:Computational Neuroscience in Python by bgalbraith on Wednesday June 04, 2014 @02:25PM (#7847245)
Very nice! I'm glad you found them useful. When I have time, I'll convert them and some unpublished examples into IPython Notebooks.