I don't really think what I suggest goes against the article you link to. It basically says: use channels when appropriate, but sometimes the best approach is to use locks.
E.g. An bank account is shared state (similar to a reference count) and the best approach is to put a mutex around it instead of fighting with channel synchronization.
There are no implications here, it's stated pretty explicitly:
"Reference counts MAY be best done by putting a mutex around an integer variable, for instance. BUT as a high-level approach, using channels to control access makes it easier to write clear, correct programs."
There is a difference between what someone with a background from other mainstream programming languages might think would be the best approach to locking (mutexes) and the idiomatic Go approach (unbuffered channels).
http://golang.org/doc/effective_go.html#concurrency
"Do not communicate by sharing memory; instead, share memory by communicating.
This approach can be taken too far. Reference counts may be best done by putting a mutex around an integer variable, for instance. But as a high-level approach, using channels to control access makes it easier to write clear, correct programs. "