from article: Each EME has its own shock and vibration damping, power protection, water cooling systems, and electromagnetic shielding to prevent interference from the ship's radar and other big radio frequency emitters.
I would imagine that would include EMP given the modern threats and US Navy's general understatement of capabilities.
You don't get to avoid the whole balance of power/MAD card because your nukes were used for EMP only.
[citation needed]
"Each EME has its own shock and vibration damping, power protection, water cooling systems, and electromagnetic shielding to prevent interference from the ship's radar and other big radio frequency emitters."
The military is no stranger to EM hardening their systems. They've been doing it since the cold war after all.
[1] https://www.navalengineers.org/SiteCollectionDocuments/2010%...
shitty citation - http://en.wikipedia.org/wiki/Zumwalt-class_destroyer
Do the containers shield against strong EM fields? Otherwise an enemy could detonate a mini em-/atom-bomb close to the target, in order to destroy their operative computer systems. Is that the reason for the heavy metal casing? In that case they probably also used Fiber cables with the lastest known modulation techniques to get (n-)Terabit/s per container. Maybe they even have radiation shielding [1] to protect from inner and outer radiation. This beast doesn't look like it solely runs on diesel, but on an atom-reactor.