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A comment on Build your own private, encrypted, open-source Dropbox clone. Parent comment

Re:Build your own private, encrypted, open-source Dropbox clone by Tho85 on Saturday July 20, 2013 @01:31PM (#6075830)
They use some kind of heuristic to make change detection faster, see their documentation: http://www.cis.upenn.edu/~bcpierce/unison/download/releases/...

Maybe that's the root cause of your issues?

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