You're making an interesting case. I haven't heard any claim that Java actually is faster than C++ in practice, just that it theoretically could be, because of JIT optimizations (then again, I don't think C/C++ is used that much in the server, anyway.) I also haven't heard of Java getting a comparative advantage due to multicore, just that FP would. But that's not to say it isn't true. You could be right. Interesting.
(The link seems to be commodity computing, like Sun blade servers).
On further investigation of a 150 million element dataset, Java was performing 1/3 again as many instructions, but missing cache half as much. I've been spending some time looking at all the JVM performance optimisations, but I still haven't worked out why this is - a random binary search isn't exactly a test case that's run time optimisation-specific. It's fascinating stuff, anyway.
+1 thoughtful and respectful debate.
I would respectfully contend that outside of micro-benchmarks (which kill Java because of long startup time and no chance to JIT) that Java is as fast as C++, and in the presence of lots of cores probably faster. This is again based in large part on my direct anecdotal experience, I would be very interested to hear about everyone else's experience in the matter.
But the real point is that with Moore's law now working on cores instead of mhz, single-threaded performance just doesn't matter that much going forward. Exponential increase and all that.
For a look at where this shit is going take a look a look at Azul.
http://www.azulsystems.com/