The water crisis affects developing nations who can and will be taken advantage of (referred to here as slavery). As the article explains, as water continues to be a scarce resource there becomes more and more power in controlling it.
I think wars over oil are bad but the ethical questions around water are significantly more fundamental.
There are other problems too. For example my city has had excellent success in water conservation. However the fixed costs of the water infrastructure haven't changed so they have to keep increasing the water rates as consumption decreases, in order to maintain revenue covering the costs. (Arguably the fixed cost of the bill should be higher and the consumption charge should be lower to better reflect reality but that falls hardest on the poorer households and would discourage conservation by the larger consumers.)
I also recall reading somewhere about other unexpected consequences of conservation - sewage pipes had significantly reduced lifespans because effluent was more concentrated resulting in greater corrosion.