Most of these things are easy to do for the majority of papers, especially in the past 20 years with the internet and modern tech and software. Plenty of frameworks exist already that have done most and/or at least some of these things, but, collectively, academia is decades behind overall.
I personally am trying to float using local LLMs to create anonymized case files and auto-suggest publishing cases in my hospital, which knowing how things work will probably never amount to anything.
Or if you want to float truly insane ideas I guess you can shop around with blackhat groups and see if anyone has stolen some juicy records/data during all the ransomware attacks and databreaches over the years, and do some rogue scientific publishing. Obviously that's crazy, but I have to admit that the notion of pirate scientists plundering and publishing data is hilarious to me.
This has all been profoundly obvious for at least well over a decade or even two now. A consequence has been that too many serious people are driven away from academia and research, to the detriment of science generally.
I've no idea what to do about all this, because people have voiced obvious and easy solutions for decades, but they are all routinely ignored.