Clojure is not fragmented, but both Scheme and Common Lisp are extremely fragmented. Scheme is probably one of the most fragmented language there is, there are literally dozens of implementations of it with various levels of compatibility[0], and it's actually gotten worse lately as many (if not most) implementations refused to migrate to R6RS and remained on R5RS instead. There are even implementations (e.g. DrRacket, formerly DrScheme) which forked/opted out the whole language.
[0] http://en.wikipedia.org/wiki/Category:Scheme_implementations
Scheme is widely (mostly?) used as a teaching and research language in Comp. Sci. schools. This sort of environment encourages experimentation with the language itself, whereas Python and Ruby are more oriented towards practitioners who are more interested in using the language as-is, not experimenting with it.
CL is defined by a standard which most of the implementations work pretty hard to adhere to. Of course, most of them have their own extensions, but a lot of these (particularly in the important areas of multithreading and foreign function calling) are now abstracted by portable libraries. This is a very different situation from the Scheme world.
That definitely isn't what I wrote.
> There are even implementations (e.g. DrRacket, formerly DrScheme) which forked/opted out the whole language.
This is reflected by the name change.
I don't think Ruby should be compared to ML. I think Ruby should be comared to OCaml. ML, if it gets compared against anything, should be compared against the category that includes Python, Ruby, Perl, and JavaScript. This category is about as fragmented as Lisp.
The problem with this new category is it doesn't have a simple, clear definition. Lisp is pretty much defined by S-expressions, and MLs by their type systems. This new family might be defined by their common approach to object systems (i.e. objects as dicts), although that's really more representative than fundamental.
[1] I'm under the vague impression that Common Lisp and SML are somewhat more fragmented than other members. I wonder if this correlates to their being the "Common"/"Standard" dialects.