News for hackers. Stuff that matters.

A comment on Show HN: PyCirclize – Circular Visualization in Python.

Re:Show HN: PyCirclize – Circular Visualization in Python by benjamin-lee on Sunday February 12, 2023 @05:30AM (#34761728)
This looks excellent for my use case, which is visualizing viroid and viroid-like circular genomes. Right now, I reluctantly use the R version but am eager to try this out. I spent countless hours making this figure [1] for my last paper and am quite confident that would have saved me a ton of time.

If you get a chance, please do publish this package in something like the Journal of Open Source Software so that I can cite it. Thanks for sharing this tool!

[1] https://www.cell.com/cell/fulltext/S0092-8674(22)01582-3#gr4

[ Parent | on HN ]
Re:Show HN: PyCirclize – Circular Visualization in Python by kkoncevicius on Sunday February 12, 2023 @06:29AM (#34762023)
Which R equivalent for circular plots did you use?
[ Parent | on HN ]
Re:Show HN: PyCirclize – Circular Visualization in Python by moshi4 on Sunday February 12, 2023 @07:33AM (#34762351)
From the citation, it looks like circlize was used.

https://github.com/jokergoo/circlize

[ Parent | on HN ]
Re:Show HN: PyCirclize – Circular Visualization in Python by moshi4 on Sunday February 12, 2023 @07:25AM (#34762317)
As you mentioned, pyCirclize can easily plot a circular genome map like the one in that paper.

> If you get a chance, please do publish this package in something like the Journal of Open Source Software so that I can cite it.

I will consider it.

[ Parent | on HN ]