"4. It is not possible to state categorically from the available data whether:
" 4a. Vas took Fruit source via cut and paste and converted to Rybka;
" 4b. Vas kept a copy of Fruit source open on another screen while he wrote Rybka himself;
" 4c. Vas absorbed ideas from Fruit (and other open sources) and then coded up Rybka hmself."
Source: http://www.top-5000.nl/evidence.htm — worth reading, but just as open to accusations of bias as the other links we've seen.
"integers are quicker than floating-point numbers"
Maybe in this case, but not in general, on all current hardware. Chances are that chess programs use little floating point code. If so, using a few floats here and there can even be faster because it allows the CPU to issue more instructions in parallel.
"According to Rajlich, he wrote a utility program (separate from Rybka and not available to users) in the C# language to generate his PSTs. As Fruit is written in C (not C#) this means there is a 100% certainty that Rajlich did not copy the Fruit PST generation code."
For low-level chess code (a bit of bit-twiddling, array lookups, arithmetic, but no library calls), I would think that porting C to C# can be an almost 100% copy-paste job.
Remarks like these make it hard for me to accept the conclusions as undeniably true. The "but everybody is doing it" argument, on the other hand, I found more convincing.