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Re:AlphaFold reveals the structure of the protein universe by biofox on Thursday July 28, 2022 @10:54AM (#32265190)
Short answer is that the ribbon representation is a visual simplification based on known structures -- they are actually composed of atoms.

They certainly do "thrash around", but that thrashing is constrained by the bonds that are formed, which greatly limits the degrees of freedom. Here's a short video of a simulation to demonstrate:

https://www.youtube.com/watch?v=fggqPtaZj8g

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