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Re:Seq – A programming language for computational genomics a... by heuermh on Thursday September 16, 2021 @10:27AM (#28552249)
I'm interested in chatting with you about this, and genomics on Spark more generally, feel free to reach out on Github or via my username at the usual suspects.
Re:Seq – A programming language for computational genomics a... by dekhn on Thursday September 16, 2021 @11:58AM (#28553437)
I left this field, actually. I cofounded Google Cloud Genomics, and when I proposed that we pivot from working with the GA4GH (very stupid APIs) to working with ADAM (real data processing) I got kicked off the team. Since then I've come to see genomics as a minefield of bad practices and don't really work in the field any more, except to help scientists run their workflows in the cloud.