I must correct you here on "Protocols like Mastodon". The protocol that underlies the Fediverse is the W3C ActivityPub Recommendation [0] and making that distinction is really important. Not doing so would encourage centralization in the same ways as discussed elsewhere in this thread for Email vs. Gmail.
Mastodon is just a fediverse app that was an early adopter of ActivityPub, and managed to become quite popular. Part of this due to a better productization, and the jumpstart this gave them offering the best features first. To many newcomers Fediverse === Mastodon, but - while understandable - this is massively shortselling the interop capabilities of the protocol.
What has already happened by Mastodon dominance is that they are driving the technological direction, but not necessarily in the best possible way and to the overall benefit of the Fediverse. They have a custom client API for instance that is becoming a de-facto standard, adopted by others out of convenience.
More details here: https://overengineer.dev/blog/2019/01/13/activitypub-final-t...
"To clarify what I mean by decentralised: applications whose main purpose is fulfilled as part of a network, where that network is not reliant on any preordained nodes. Decentralised applications are also known as “federated”. There is also a more specific term “distributed”, also known as “peer to peer”. I won’t cover the distinction with the more specific terms because it’s not relevant here. I use the word application in a looser sense, to also cover protocols and specifications."
Even so, IRC has no business in this list per the authors definition.
The "network" part is arguable, but IRC does not require any pre-ordained nodes, which matches the author's definition.
It's a small part of full decentralization, but an important one. Being able to point your Facebook Messenger client at a different server would be a big step.
Interestingly, you used to be able to do the inverse: point your XMPP client at Facebook Messenger. I'm pretty sure they never supported federation, but you could connect clients to multiple servers and have a relatively seamless experience from a single client.
So the author seems to take "decentralized" here to mean "fully decentralized and peer-to-peer", which is indeed an unconventionally strong definition. But later on, they mention IRC, which is centralized by any definition... Actually, the author doesn't seem to be working from a strong definition at all and they seem to have given this very shallow thought and research.