If you're new at it and you're trying to induce them as much as possible, then you're going to be falling asleep and waking up at arbitrary times, or trying to trick your brain into remaining awake while the rest of your body falls asleep. Also, if you have a particularly intense lucid dream, it's not uncommon to wake up immediately after. So I would say yes, if lucid dreaming doesn't come naturally to you, then inducing them will disrupt your natural sleep patterns.