I thought passing template instantiations over an ABI boundary was generally discouraged and thought to be asking for trouble. I guess this isn't really at odds with what the paper is saying though - it could still be that a lot of people are doing so.
edit Thinking about Hyrum's Law, [0] mentioned in the article, makes me think perhaps there was an upside to Java firmly refusing to support any kind of ahead-of-time compilation for so long. It fully closed the door on any funny business distributing Java packages as brittle precompiled native-code blobs, ensuring the bytecode format remained the way that Java packages were distributed, presumably avoiding some fraction of the issues C++ now faces.
Of course, Java still has backward-compatibility obligations, but unlike in C++ they align pretty well with API compatibility, if I understand things correctly.
http://www.open-std.org/jtc1/sc22/wg21/docs/papers/2020/p186...
"there is a non-trivial amount of performance that we cannot recoup because of ABI concerns. We cannot remove runtime overhead involved in passing unique_ptr by value, nor can we change std::hash or class layout for unordered_map , without forcing a recompile everywhere etc. etc."