It's easy to say "we should never have" in retrospect. But you're basically accusing programmers back in the late 70s of having insufficient foresight to see problems that would make their decisions seem bad almost half a decade later.
We also should never have let companies sell cigarettes. Or burn fossil fuels. Or start social networks.
Having said that, though, we could at least wish that some variant of the Mac's old idea of separate creator and document codes stored as metadata had caught on. Sure, it'd have been a few more bytes per directory entry (to be specific, five more bytes!), but it was a lot more flexible -- and if more operating systems had been built with that "document types are metadata" idea, that metadata could have been replaced with MIME types later on, like it was on BeOS.
The URL standard was published in 1994.
Sure, in a vacuum you could read view my comment as meaning in all time, but given that the parent comment is discussing ICANN domains and my comment was relevant to that, I think it’s a little uncharitable to do so.