The force cannot possibly depend on the drive's kinetic energy, because the kinetic energy is based on the velocity, which is relative to the frame of reference you use to measure it. If your frame of reference is the drive itself, then the kinetic energy is always zero, and conversely it's always possible to use a remote galaxy as a frame of reference, which makes the kinetic energy (and velocity) absurdly high.
I suppose they used a very precise equivalent of a dynamometer that necessarily required some work to be done to give out a reading and this is what it showed.