We have many different ways of counting deaths. We either count the people who had a test; or we count death certificates; or we do surveillance to see what respiratory illnesses are circulating and how many people are searching google for flu-like symptoms and how many people are attending primary care and ED for flu-like symptoms.
(and which ever method we pick, if we pick the same method for covid-19 we see many more deaths)
It's obvious just from comparing the numbers in the article to the ones in the comment I'm replying to that lack of testing has a much, much bigger effect on confirmed flu numbers than confirmed Covid-19 ones - confirmed Covid-19 deaths are at 2/3 to 1/2 of excess deaths, whereas confirmed flu is at 1/4 to 1/8th of estimated flu deaths, and the flu estimate does more work to exclude unrelated deaths than just counting raw excess deaths would. The supposedly apples-to-apples comparisons in the article looks to be even less directly comparable than the apples-to-oranges one it's rejecting.