Re:Ontology for the life sciences: genes, proteins, diseases...
by jerven on Tuesday January 21, 2020 @01:55AM
(#22104832)
There are a few which are really great. Basically my shortcut is Chris Mungall involved then it is logically and biologically ;) sound.
While we at SIB are more towards the RDF/SPARQL part of the spectrum (https://edu.sib.swiss/course/view.php?id=440). We do use OWL and obofoundry projects like Uberon and GO. For UniProt I took a lot of pain to make sure it is really compatible. We did the same for Rhea and ChEBI. This has paid of handsomely in new query capabilities.
While we at SIB are more towards the RDF/SPARQL part of the spectrum (https://edu.sib.swiss/course/view.php?id=440). We do use OWL and obofoundry projects like Uberon and GO. For UniProt I took a lot of pain to make sure it is really compatible. We did the same for Rhea and ChEBI. This has paid of handsomely in new query capabilities.