Actually, a lot of economists assume exactly that, call it "revealed preference"[0] and then claim that people are lying when they complain about it.
A bias, on the other hand, is if we ask sometime if you want to eat 2 or 3 donuts, and you answer 2, but then after further studies, we see that the amount you eat depends on, say, the size of the plate in front of you, then we know that there's something influencing your decision which you may not be aware of and which theoretically speaking "shouldn't" influence your decision.
Revealed preferences don't mean that everyone makes perfect decisions all the time. It just means that, if you want to find out what people actually want, then the best way to do it is to observe what they actually do.
That is, given a revealed preference and someone claiming they've identified a bias, I start from the presumption the revealed preference is actually rational and the explanation of the bias is wrong, because, well, the article is clearly correct. I see it online all the time. There's a bias bias, the presumption that if someone explains why something is biased, that's it, case closed, no further analysis needed. I see that bias in myself. It's hard to overcome, which is why I (try to) start by presuming the revealed preference is correct.
People's explanations of their revealed preferences are, by contrast, hot steaming garbage. People are terrible at explaining their reasons. So terrible that I think it actually plays into bias bias, because if you take people's explanations seriously they sound incredibly irrational, so it's merely a matter of trying to explain their irrationality. It seems so fruitful. But while studying patterns in rationalization is probably an interesting topic of its own, studying rationalization shouldn't be confused for studying what people do. In general, I (try to) start out by discarding someone's claimed reasons for doing something, unless they do a very good job of convincing me they're actually good at introspection and have made an at least halfway serious attempt at it.
People are complex psychological creatures and this whole issues of irrational or rational behavior is compounded by the fact that people can /learn/ system 2 patterns of thinking so well that they become system 1 patterns. Those are essentially habits.
So with your rational mind, it is worth identifying any biases you want to codify in your system 1 brain to minimize cognitive costs. But that's an option. And I think we have that option because there is a giant tradeoff between spending time and energy thinking versus getting a good enough result (out of the many decisions and processes we have to carry out each day).
(With respect to the planning fallacy, I suppose there are benefits to underestimating the time it will take. If projects are really much harder than expected, it may never be emotionally worth starting them because they are too monumental. So we have a bias that makes us more optimistic so we actually start doing stuff which helps us in the long run. What I mean is that you can spin it as a good thing. It may be a wrong intellectual assessment, and sometimes that matters immensely, but it is also quite possibly rational for humans to have this bias because it helps them get more stuff done. I'm not a behavior economists or a psychologist, to be fair.)
I think you're missing the value in finding that some things are irrational. Of course no one assumes people make perfect decisions 100% of the time, and of course there are cases where making the better decisions isn't worth it - but it's incredibly useful to know in which cases people usually make "wrong" decisions, in order to, when necessary, find antidotes. Wrong is a synonym for irrational here, and is a placeholder for "contrary to what the person would have chosen to do, had they had all the information".
Take the "planning fallacy" - a pretty well known bias in which people underestimate how long things projects will take. Knowing that it exists is what leads people who want to get the correct answer to use "tricks" to get a more real answer (like taking the so-called "outside view", and estimating how long a project will take based on how long similar projects took in the past).