The standard library (with all its' duplicate code resulting from hardcore templating) will blow up your flash space usage significantly, to the point where you will run out of it sooner than you expect. You will spend time finding alternative standard libraries that are size-optimized and you might end up rewriting a lot of what you take for granted in your C++ daily usage. For example, the Arduino environment is C++-based, but it's not anything like on the desktop due to it not shipping an std:: .

Your typical heap-happy usage will not go down well on a microcontroller, either. Having very constrained RAM makes heap fragmentation much more of an issue.