More anecdata: I take the bike when I can, and I have had motorists run into me a few times.
Every single time has been on dedicated bike roads.
Don't get me wrong -- I have had many, many more near misses on regular roads, but regular roads are built in ways which make it easy to convert impending collisions into near misses. Bike roads tend to not have those margins.
Before dedicated bike roads can be considered a solution, they must be built in ways which make me feel safer when I choose them.
On Albert St and Swanston St in (East) Melbourne, the separated lane stops at intersections so that cars can use the bike lane to turn left. People riding bikes are supposed to give way to people driving cars and then filter around the stopped cars into the bike box ahead of the cars. I never really feel safe using the Albert St lane for this and other reasons. Fortunately I have other options.
In my experience I also have much better visibility at junctions on the main road instead of on bicycle lanes that are closer to walls and hedges and have 3 or 4 meters less of buffer between me and incoming cars from the right. I'm also less visible to them. It means to slow down at every side junction and over 100 km it would make a huge difference in time and wear.
As a matter of fact I tend to stay on the road all the time. A consequence is that in the last years I started going over dirt roads along channels and rivers. It's very quiet and more relaxing than being close to the noise of cars.