Re:Structural Propensity Database of Proteins
by tiplus on Tuesday June 20, 2017 @05:04AM
(#14593066)
If I understand correctly, the product is the database and its Tensorflow API?
I am wondering how this compares to the TALOS-N [1] server from Ad Bax (NIH) with 9000+ proteins in its DB? This, too, uses machine learning to 'fit' a predictor for secondary structure (dihedral angles) for backbone and side chain torsions based on chemical shifts.
Re:Structural Propensity Database of Proteins
by ktamiola on Tuesday June 20, 2017 @04:20PM
(#14598232)
And yes, the product right now is Keras and Tensorflow database integration + the interactive database interface. The tools around are currently under stringent testing.
I am wondering how this compares to the TALOS-N [1] server from Ad Bax (NIH) with 9000+ proteins in its DB? This, too, uses machine learning to 'fit' a predictor for secondary structure (dihedral angles) for backbone and side chain torsions based on chemical shifts.
[1] https://spin.niddk.nih.gov/bax/software/TALOS-N/