That said, we shouldn't generalize Fraunhofer's economics to the rest of the software industry. If it was just this kind of thing I would have zero problems with it. But we should be suspicious of software patents because the patent system implicitly rewards ideas that are broad (more things a patent touches, more $$$) and non-inventive (less work to come up with a patent, more $$$). Patents can be dangerous to human progress, and the patent system encourages patents that are. A broad patent could hold a whole industry hostage for 20 years, which is an eternity in technology. I sympathize more with folks who want to get rid of the whole thing for this reason.
Even some private individuals like me (I think the company was called Fluendo?)
(edit: not Stockhausen, thank you!)
It's rather disingenuous, the assumption with the structure of your question is "within the framework of 'patents can be good'".
Coming at this from an "this is a real-life example of software patents being {good|bad}".