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Re:Announcing ggraph: A grammar of graphics for relational data by thomasp85 on Saturday February 25, 2017 @03:29PM (#13733655)
Depending on the number of time points you can use the facetting functions in ggraph to create small multiples
Re:Announcing ggraph: A grammar of graphics for relational data by apathy on Saturday February 25, 2017 @09:34PM (#13735311)
Sacha Epskamp's tutorial has a nice section on this:

http://sachaepskamp.com/files/Cookbook.html

Also the section on penalized Ising models is great, I haven't seen anything else like it.

Re:Announcing ggraph: A grammar of graphics for relational data by afandian on Saturday February 25, 2017 @03:40PM (#13733706)
About 10,000 relations, each with a unique point in time. Looks like the facet isn't quite what I want.
Re:Announcing ggraph: A grammar of graphics for relational data by thomasp85 on Saturday February 25, 2017 @03:49PM (#13733744)
You can of course animate it like this https://twitter.com/thomasp85/status/694905779539812352 but a static representation is often easier to interogate. I would try to bin the time points and facet on them...