In case of the package, which package exactly did you install?
What I have _at the moment_ and doesn't work that well, I got through the 'flashplugin-nonfree' package which if I understand is the 'preferred' way to install flash on ubuntu 64.
Seriously, are you SURE you tried the x64 version? From the looks of it, you didn't, so I'd suggest you following the steps to get the x64 package.
Something like this should work: http://nxadm.wordpress.com/2009/04/26/install-64-bit-adobe-f... http://www.cyberciti.biz/tips/install-flash-10-ubuntu-linux-...
It's not flashplugin-nonfree, as the x64 version is still a beta package available separately (but drastically better than the standard one on x64 machines).
Anyways trying it again nonetheless, the blinking is still going on with scrolling, going to see if performance/crashing at least improves.