That is very conservatively (2 passengers/car) 1000 cars every 5 miles with on 125ft spacing equivalent to a perfectly functioning 10 lane freeway.
More realistically (1 passenger/car) 2000 cars every 3 miles on 250ft spacing is equivalent to a 60 lane normal freeway.
For the air travel equivalent (much lower latency, but higher cost) you would need 1000 full 737-900 every hour (8000/day) compared to the total number of flights on California on a busy day, 3000.
If you build it, will they come?
(Even ignoring the TSA, 6B in ridership fees to be made up, and general messiness of American commuters.)
So now your 1300 passengers, generously, are spread out over 20 miles of freeway, instead of three.
(2600 passengers/20 miles) * (1 car / passenger) * (250 lane-ft/car) * (1 mile/5280ft) = 6.1 lanes.
Now, that was assuming one passenger per car. Add a single bus per mile-lane (seated passengers only) and this drops to four lanes. With self-driving cars and more busses, you could safely add only a single dedicated self-driving car lane and a sigle dedicated bus lane in each direction, and still have room to increase "ridership". For the price, I think that is ridiculous.
The problem with this California idea is that its proponents evoke the Bullet Train but it will never be the Bullet Train. The Japanese built that thing in 1964, which is when we should have started modernizing our own railways but didn't because GM decreed that its buses and trucks should replace railroads, which they largely succeeded. The resources for a huge project existed then; they don't exist today.
It's also worth pointing out that California is in the political dog house post-2016 elections. They backed the wrong horse, their dominant party is in the minority nationally, and they are not going to get a lot of sympathy in the Congress or from most other states who are going to be asked to foot the bill for this turkey. If the people of California want to build this thing, go right ahead; no one's stopping you. Just don't ask the rest of the country to pay for it.
There is plenty of room even without population transfers to neighboring states.
It seems to me that California's highway problem is one of simple over crowding. Even if they built ten high speed rails between SF and LA, it would probably not make much of a difference, and I'm not even talking about the issue of needing a vehicle once you arrive at LA central terminus. Trains carry hundreds of people; let us say, a few thousand at any given time might be carried on high speed rail cars, but this is a tiny fraction of the millions of motorists clogging the highways 24x7 all up and down the coast.
I see no solution to California's clogged highways other than to siphon some of the population off to neighboring states that are vastly less populous. Perhaps this will happen naturally as technology makes it easier to disperse workers over broader geographical areas. It seems to me that huge cities are a legacy thing anyway.
Probably the next big thing will not be speeded up 18th century iron horses, but electric long range buses and self-driving cars that will safely and quickly negotiate the computerized traffic grids of the future.
California ought to spend a few billion on embedded markers and sensors in its roads that self-driving vehicles can access; probably this will be a much better investment in the long run.