This is actually quite a tricky thing to do right because to be able to jog the machine out of a shut-down like that you have to re-enable it in a potentially un-safe situation. For each and every little challenge like that we found a good solution but some of those were real head-scratchers.
A really nasty one that I recall was that when you power up a bunch of latches they can come up in an undefined state, so the decision was made to include a detector for that undefined state which first would have to be cleared before the output of the latches was allowed to influence the motors.
This worked well in practice but given the restrictions of the machine this was all done on it took a bit of thinking, the solution we settled on was a magic sequence output on the parallel port indicating the system had successfully reset after which the relay powering the motor drivers would engage. So until that relay triggered everything else was ignored.
This was already important enough with stepper drivers, but once we switched to servos for some of the more demanding applications it became crucial to safe operation that the drivers would never ever be energized with faulty inputs. A servo driving a ball-screw will happily wreck itself, the machine it is bolted on to and anything standing in-between (including the operator) if it suddenly gets driven to -10 or +10 V and naturally, you'd always get one of those two, never the safe '0'.
Separation of duties is a good principle, and wherever possible you should use it.
https://en.wikipedia.org/wiki/Separation_of_duties
But in the case of a single tech guy in a company there isn't a whole lot you can do in that direction, so it is best to clearly assign ownership and make sure that the people involved realize full well the consequences of a fuck-up.
The fact that a simple error could cause someone to lose a limb or die does wonders for your focus.