Cornell has launched a program[1] that aims to be what you're describing here. There's also a Technology Management MBA from the University of Washington's Foster School[2], although it's more of a technology-oriented part-time MBA than a traditional MBA targeted at engineers.

[1] Cornell Tech MBA: http://tech.cornell.edu/programs/masters-programs/johnson-co...

[2] UW Foster Technology Management MBA: http://foster.uw.edu/academics/degree-programs/technology-ma...