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Re:Introducing unlimited private repositories by WillAbides on Wednesday May 11, 2016 @08:42AM (#11674698)
If you are a non-profit, your bill can be $0. You just need to sign up here[0] and send in the data requested.

[0] https://github.com/nonprofit

Re:Introducing unlimited private repositories by cstejerean on Wednesday May 11, 2016 @08:58AM (#11674819)
It doesn't seem this is valid for academic nonprofits (from the linked page) so I don't think EdX would qualify.
Re:Introducing unlimited private repositories by WillAbides on Wednesday May 11, 2016 @09:09AM (#11674909)
That's right. I didn't notice it was academic. GitHub has a similar deal for education[0]. The bottom of the page has a link to apply for a free educational org.

[0] https://education.github.com/